Revert "Revert layer proto format back to proto2"

This reverts commit 5dad909092932dc5c02d1be2f6ece1a3d06908ad.

Reason for revert: 298512106

Change-Id: I6c371f9958b2112f51ba801131ee912dff5a4da7
diff --git a/services/surfaceflinger/layerproto/LayerProtoParser.cpp b/services/surfaceflinger/layerproto/LayerProtoParser.cpp
index c3d0a40..8d48070 100644
--- a/services/surfaceflinger/layerproto/LayerProtoParser.cpp
+++ b/services/surfaceflinger/layerproto/LayerProtoParser.cpp
@@ -193,13 +193,13 @@
         }
     }
 
-    if (layerProto.has_parent()) {
+    if (layerProto.parent() != -1) {
         if (layerMap.count(layerProto.parent()) > 0) {
             currLayer->parent = layerMap[layerProto.parent()];
         }
     }
 
-    if (layerProto.has_z_order_relative_of()) {
+    if (layerProto.z_order_relative_of() != -1) {
         if (layerMap.count(layerProto.z_order_relative_of()) > 0) {
             currLayer->zOrderRelativeOf = layerMap[layerProto.z_order_relative_of()];
         }