diff --git a/tools/aapt2/link/FlaggedResources_test.cpp b/tools/aapt2/link/FlaggedResources_test.cpp
index 67d0c41..6293008 100644
--- a/tools/aapt2/link/FlaggedResources_test.cpp
+++ b/tools/aapt2/link/FlaggedResources_test.cpp
@@ -76,6 +76,10 @@
 
   std::string output;
   DumpResourceTableToString(loaded_apk.get(), &output);
+  ASSERT_EQ(output.find("bool4"), std::string::npos);
+  ASSERT_EQ(output.find("str1"), std::string::npos);
+  ASSERT_EQ(output.find("layout2"), std::string::npos);
+  ASSERT_EQ(output.find("removedpng"), std::string::npos);
 }
 
 TEST_F(FlaggedResourcesTest, DisabledResourcesRemovedFromTableChunks) {
@@ -87,6 +91,8 @@
 
   ASSERT_EQ(output.find("bool4"), std::string::npos);
   ASSERT_EQ(output.find("str1"), std::string::npos);
+  ASSERT_EQ(output.find("layout2"), std::string::npos);
+  ASSERT_EQ(output.find("removedpng"), std::string::npos);
 }
 
 TEST_F(FlaggedResourcesTest, DisabledResourcesInRJava) {
diff --git a/tools/aapt2/link/TableMerger.cpp b/tools/aapt2/link/TableMerger.cpp
index d216979..1bef5f8 100644
--- a/tools/aapt2/link/TableMerger.cpp
+++ b/tools/aapt2/link/TableMerger.cpp
@@ -377,6 +377,8 @@
   file_ref->SetSource(file_desc.source);
   file_ref->type = file_desc.type;
   file_ref->file = file;
+  file_ref->SetFlagStatus(file_desc.flag_status);
+  file_ref->SetFlag(file_desc.flag);
 
   ResourceTablePackage* pkg = table.FindOrCreatePackage(file_desc.name.package);
   pkg->FindOrCreateType(file_desc.name.type)