| Bram Moolenaar | 071d427 | 2004-06-13 20:20:40 +0000 | [diff] [blame] | 1 | " Vim syntax file |
| 2 | " Language: AceDB model files |
| 3 | " Maintainer: Stewart Morris (Stewart.Morris@ed.ac.uk) |
| 4 | " Last change: Thu Apr 26 10:38:01 BST 2001 |
| 5 | " URL: http://www.ed.ac.uk/~swmorris/vim/acedb.vim |
| 6 | |
| 7 | " Syntax file to handle all $ACEDB/wspec/*.wrm files, primarily models.wrm |
| 8 | " AceDB software is available from http://www.acedb.org |
| 9 | |
| 10 | " For version 5.x: Clear all syntax items |
| 11 | " For version 6.x: Quit when a syntax file was already loaded |
| 12 | if version < 600 |
| 13 | syntax clear |
| 14 | elseif exists("b:current_syntax") |
| 15 | finish |
| 16 | endif |
| 17 | |
| 18 | syn keyword acedbXref XREF |
| 19 | syn keyword acedbModifier UNIQUE REPEAT |
| 20 | |
| 21 | syn case ignore |
| 22 | syn keyword acedbModifier Constraints |
| 23 | syn keyword acedbType DateType Int Text Float |
| 24 | |
| 25 | " Magic tags from: http://genome.cornell.edu/acedocs/magic/summary.html |
| 26 | syn keyword acedbMagic pick_me_to_call No_cache Non_graphic Title |
| 27 | syn keyword acedbMagic Flipped Centre Extent View Default_view |
| 28 | syn keyword acedbMagic From_map Minimal_view Main_Marker Map Includes |
| 29 | syn keyword acedbMagic Mapping_data More_data Position Ends Left Right |
| 30 | syn keyword acedbMagic Multi_Position Multi_Ends With Error Relative |
| 31 | syn keyword acedbMagic Min Anchor Gmap Grid_map Grid Submenus Cambridge |
| 32 | syn keyword acedbMagic No_buttons Columns Colour Surround_colour Tag |
| 33 | syn keyword acedbMagic Scale_unit Cursor Cursor_on Cursor_unit |
| 34 | syn keyword acedbMagic Locator Magnification Projection_lines_on |
| 35 | syn keyword acedbMagic Marker_points Marker_intervals Contigs |
| 36 | syn keyword acedbMagic Physical_genes Two_point Multi_point Likelihood |
| 37 | syn keyword acedbMagic Point_query Point_yellow Point_width |
| 38 | syn keyword acedbMagic Point_pne Point_pe Point_nne Point_ne |
| 39 | syn keyword acedbMagic Derived_tags DT_query DT_width DT_no_duplicates |
| 40 | syn keyword acedbMagic RH_data RH_query RH_spacing RH_show_all |
| 41 | syn keyword acedbMagic Names_on Width Symbol Colours Pne Pe Nne pMap |
| 42 | syn keyword acedbMagic Sequence Gridded FingerPrint In_Situ Cosmid_grid |
| 43 | syn keyword acedbMagic Layout Lines_at Space_at No_stagger A1_labelling |
| 44 | syn keyword acedbMagic DNA Structure From Source Source_Exons |
| 45 | syn keyword acedbMagic Coding CDS Transcript Assembly_tags Allele |
| 46 | syn keyword acedbMagic Display Colour Frame_sensitive Strand_sensitive |
| 47 | syn keyword acedbMagic Score_bounds Percent Bumpable Width Symbol |
| 48 | syn keyword acedbMagic Blixem_N Address E_mail Paper Reference Title |
| 49 | syn keyword acedbMagic Point_1 Point_2 Calculation Full One_recombinant |
| 50 | syn keyword acedbMagic Tested Selected_trans Backcross Back_one |
| 51 | syn keyword acedbMagic Dom_semi Dom_let Direct Complex_mixed Calc |
| 52 | syn keyword acedbMagic Calc_upper_conf Item_1 Item_2 Results A_non_B |
| 53 | syn keyword acedbMagic Score Score_by_offset Score_by_width |
| 54 | syn keyword acedbMagic Right_priority Blastn Blixem Blixem_X |
| 55 | syn keyword acedbMagic Journal Year Volume Page Author |
| 56 | syn keyword acedbMagic Selected One_all Recs_all One_let |
| 57 | syn keyword acedbMagic Sex_full Sex_one Sex_cis Dom_one Dom_selected |
| 58 | syn keyword acedbMagic Calc_distance Calc_lower_conf Canon_for_cosmid |
| 59 | syn keyword acedbMagic Reversed_physical Points Positive Negative |
| 60 | syn keyword acedbMagic Point_error_scale Point_segregate_ordered |
| 61 | syn keyword acedbMagic Point_symbol Interval_JTM Interval_RD |
| 62 | syn keyword acedbMagic EMBL_feature Homol Feature |
| 63 | syn keyword acedbMagic DT_tag Spacer Spacer_colour Spacer_width |
| 64 | syn keyword acedbMagic RH_positive RH_negative RH_contradictory Query |
| 65 | syn keyword acedbMagic Clone Y_remark PCR_remark Hybridizes_to |
| 66 | syn keyword acedbMagic Row Virtual_row Mixed In_pool Subpool B_non_A |
| 67 | syn keyword acedbMagic Interval_SRK Point_show_marginal Subsequence |
| 68 | syn keyword acedbMagic Visible Properties Transposon |
| 69 | |
| 70 | syn match acedbClass "^?\w\+\|^#\w\+" |
| 71 | syn match acedbComment "//.*" |
| 72 | syn region acedbComment start="/\*" end="\*/" |
| 73 | syn match acedbComment "^#\W.*" |
| 74 | syn match acedbHelp "^\*\*\w\+$" |
| 75 | syn match acedbTag "[^^]?\w\+\|[^^]#\w\+" |
| 76 | syn match acedbBlock "//#.\+#$" |
| 77 | syn match acedbOption "^_[DVH]\S\+" |
| 78 | syn match acedbFlag "\s\+-\h\+" |
| 79 | syn match acedbSubclass "^Class" |
| 80 | syn match acedbSubtag "^Visible\|^Is_a_subclass_of\|^Filter\|^Hidden" |
| 81 | syn match acedbNumber "\<\d\+\>" |
| 82 | syn match acedbNumber "\<\d\+\.\d\+\>" |
| 83 | syn match acedbHyb "\<Positive_\w\+\>\|\<Negative\w\+\>" |
| 84 | syn region acedbString start=/"/ end=/"/ skip=/\\"/ oneline |
| 85 | |
| 86 | " Rest of syntax highlighting rules start here |
| 87 | |
| 88 | " Define the default highlighting. |
| 89 | " For version 5.7 and earlier: only when not done already |
| 90 | " For version 5.8 and later: only when an item doesn't have highlighting yet |
| 91 | if version >= 508 || !exists("did_acedb_syn_inits") |
| 92 | if version < 508 |
| 93 | let did_acedb_syn_inits = 1 |
| 94 | command -nargs=+ HiLink hi link <args> |
| 95 | else |
| 96 | command -nargs=+ HiLink hi def link <args> |
| 97 | endif |
| 98 | |
| 99 | HiLink acedbMagic Special |
| 100 | HiLink acedbHyb Special |
| 101 | HiLink acedbType Type |
| 102 | HiLink acedbOption Type |
| 103 | HiLink acedbSubclass Type |
| 104 | HiLink acedbSubtag Include |
| 105 | HiLink acedbFlag Include |
| 106 | HiLink acedbTag Include |
| 107 | HiLink acedbClass Todo |
| 108 | HiLink acedbHelp Todo |
| 109 | HiLink acedbXref Identifier |
| 110 | HiLink acedbModifier Label |
| 111 | HiLink acedbComment Comment |
| 112 | HiLink acedbBlock ModeMsg |
| 113 | HiLink acedbNumber Number |
| 114 | HiLink acedbString String |
| 115 | |
| 116 | delcommand HiLink |
| 117 | endif |
| 118 | |
| 119 | let b:current_syntax = "acedb" |
| 120 | |
| 121 | " The structure of the model.wrm file is sensitive to mixed tab and space |
| 122 | " indentation and assumes tabs are 8 so... |
| 123 | se ts=8 |