versioner: clean up tests, test runner.

Git doesn't track empty directories, so most of the tests would fail on
a fresh checkout because of dependencies/common being missing. Remove
the use of dependencies from all of the non-dependency related tests.

Change-Id: I09cc5765aae1576914c1c5d7dfa3fb666eab4a3f
diff --git a/tools/versioner/tests/compilation_error/run.sh b/tools/versioner/tests/compilation_error/run.sh
index d26ab70..8babb73 100644
--- a/tools/versioner/tests/compilation_error/run.sh
+++ b/tools/versioner/tests/compilation_error/run.sh
@@ -1 +1 @@
-versioner headers dependencies -p platforms -r arm -a 9
+versioner headers -p platforms -r arm -a 9